EnhancerDB
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  3. rs539095453[chr1:203873541]
Enhancers that have rs539095453[chr1:203873541]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203872551 203879315 enh12568
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs539095453[chr1:203873541]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203872375 203873575 ZNF143 GTRD no Epithelial (MCF-7) 21369916
chr1 203873009 203873547 ZNF143 GTRD no Epithelial (MCF-7) 21369918
chr1 203873348 203873612 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369921
chr1 203873527 203873548 IRF1 JASPAR yes 34664314
chr1 203873529 203873544 PRDM1 JASPAR yes 34664316
chr1 203873531 203873552 IRF1 JASPAR yes 34664317
chr1 203873533 203873548 PRDM1 JASPAR yes 34664318
chr1 203873533 203873548 STAT2 JASPAR yes 34664319
chr1 203873534 203873548 SPIC JASPAR yes 34664320
chr1 203873534 203873548 STAT1 JASPAR yes 34664321
chr1 203873535 203873556 IRF1 JASPAR yes 34664322
chr1 203873536 203873551 FOXP1 JASPAR yes 34664323
chr1 203873536 203873557 IRF1 JASPAR yes 34664324
chr1 203873537 203873558 IRF1 JASPAR yes 34664325
chr1 203873538 203873553 FOXP1 JASPAR yes 34664326
chr1 203873538 203873559 IRF1 JASPAR yes 34664327
chr1 203873540 203873555 FOXP1 JASPAR yes 34664328
chr1 203873541 203873556 FOXP1 JASPAR yes 34664329
Genes associated with rs539095453[chr1:203873541], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More