EnhancerDB
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  3. rs539115054[chr1:165824752]
Enhancers that have rs539115054[chr1:165824752]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 165800587 165834795 enh699
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539115054[chr1:165824752]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 165824736 165824757 IRF1 JASPAR yes 32804240
chr1 165824737 165824752 FOXP1 JASPAR yes 32804241
chr1 165824737 165824758 IRF1 JASPAR yes 32804242
chr1 165824741 165824762 IRF1 JASPAR yes 32804243
chr1 165824742 165824757 FOXP1 JASPAR yes 32804244
chr1 165824742 165824763 IRF1 JASPAR yes 32804245
chr1 165824743 165824764 IRF1 JASPAR yes 32804246
chr1 165824744 165824759 FOXP1 JASPAR yes 32804247
chr1 165824744 165824765 IRF1 JASPAR yes 32804248
chr1 165824745 165824766 IRF1 JASPAR yes 32804249
chr1 165824746 165824761 FOXP1 JASPAR yes 32804250
chr1 165824746 165824767 IRF1 JASPAR yes 32804251
chr1 165824747 165824762 FOXP1 JASPAR yes 32804252
chr1 165824747 165824768 IRF1 JASPAR yes 32804253
chr1 165824748 165824763 FOXP1 JASPAR yes 32804254
chr1 165824748 165824769 IRF1 JASPAR yes 32804255
chr1 165824749 165824764 FOXP1 JASPAR yes 32804256
chr1 165824750 165824765 FOXP1 JASPAR yes 32804257
chr1 165824751 165824766 FOXP1 JASPAR yes 32804258
chr1 165824752 165824767 FOXP1 JASPAR yes 32804259
Genes associated with rs539115054[chr1:165824752], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More