EnhancerDB
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  3. rs539174107[chr1:2475021]
Enhancers that have rs539174107[chr1:2475021]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2471065 2481828 enh9
Bone Marrow (K562) Prostate (RWPE1) Blood (T-cell) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs539174107[chr1:2475021]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2474519 2476344 ZNF143 GTRD no Epithelial (MCF-7) 107801827
chr1 2474585 2478941 TCF7L2 GTRD no Colon (HCT116) 107801828
chr1 2474585 2478941 TCF7L2 GTRD no Colon (HCT116) 107801829
chr1 2475018 2475029 E2F4 JASPAR yes 26243478
chr1 2475021 2475027 SP1 TRANSFAC yes 26243479
Genes associated with rs539174107[chr1:2475021], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More