EnhancerDB
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  3. rs539185546[chr2:238409663]
Enhancers that have rs539185546[chr2:238409663]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238403125 238413599 enh19397
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus
Transcript factors that have rs539185546[chr2:238409663]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238409652 238409666 GLIS2 JASPAR yes 82116831
chr2 238409652 238409666 ZIC1 JASPAR yes 82116832
chr2 238409652 238409667 ZIC3 JASPAR yes 82116833
chr2 238409652 238409667 ZIC4 JASPAR yes 82116834
Genes associated with rs539185546[chr2:238409663], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More