EnhancerDB
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  3. rs539200167[chr1:55419627]
Enhancers that have rs539200167[chr1:55419627]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55413725 55423635 enh11878
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs539200167[chr1:55419627]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55419619 55419629 TFAP4 JASPAR yes 29009954
chr1 55419624 55419628 NFE TRANSFAC yes 29009955
chr1 55419624 55419637 SMAD2 JASPAR yes 29009956
Genes associated with rs539200167[chr1:55419627], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More