EnhancerDB
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  3. rs539226165[chr1:56045027]
Enhancers that have rs539226165[chr1:56045027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 56036104 56052895 enh26722
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus
Transcript factors that have rs539226165[chr1:56045027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 56045025 56045046 IRF1 JASPAR yes 29051425
chr1 56045027 56045031 H1TF2 TRANSFAC yes 29051426
chr1 56045027 56045031 NFE TRANSFAC yes 29051427
chr1 56045027 56045031 SRF TRANSFAC yes 29051428
chr1 56045027 56045042 STAT2 JASPAR yes 29051429
Genes associated with rs539226165[chr1:56045027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More