EnhancerDB
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  3. rs539263288[chr1:226540628]
Enhancers that have rs539263288[chr1:226540628]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226528469 226546419 enh964
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Ovary Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs539263288[chr1:226540628]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226540616 226540636 TP53 JASPAR yes 35811113
chr1 226540621 226540639 SRF JASPAR yes 35811115
chr1 226540622 226540630 FEV JASPAR yes 35811116
Genes associated with rs539263288[chr1:226540628], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More