EnhancerDB
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  3. rs539265960[chr1:218760279]
Enhancers that have rs539265960[chr1:218760279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218755885 218761549 enh27512
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Stomach Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs539265960[chr1:218760279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218760160 218760530 ZNF143 GTRD no Epithelial (MCF-7) 21381021
chr1 218760263 218760284 REST JASPAR yes 35393217
chr1 218760274 218760284 TFCP2 JASPAR yes 35393219
chr1 218760279 218760294 STAT1 JASPAR yes 35393220
Genes associated with rs539265960[chr1:218760279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More