EnhancerDB
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  3. rs539280623[chr6:42330951]
Enhancers that have rs539280623[chr6:42330951]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42330865 42350575 enh9115
Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs539280623[chr6:42330951]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42330940 42330952 ZBTB7A JASPAR yes 101712860
chr6 42330941 42330953 GLI2 JASPAR yes 101712861
chr6 42330943 42330957 GLIS3 JASPAR yes 101712862
Genes associated with rs539280623[chr6:42330951], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More