EnhancerDB
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  3. rs539290359[chr1:28394618]
Enhancers that have rs539290359[chr1:28394618]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28387565 28408035 enh180
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Heart
Transcript factors that have rs539290359[chr1:28394618]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28394614 28394623 SNAI2 JASPAR yes 27736452
chr1 28394614 28394624 ID4 JASPAR yes 27736453
chr1 28394617 28394630 NFKB1 JASPAR yes 27736454
Genes associated with rs539290359[chr1:28394618], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More