EnhancerDB
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  3. rs539400033[chr9:117481289]
Enhancers that have rs539400033[chr9:117481289]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 117478296 117488455 enh42217
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Colon (HCT116) Lung (PC-9) Blood (T-cell)
chr9 117481130 117481475 vista63103
VISTA
Transcript factors that have rs539400033[chr9:117481289]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 117481076 117481580 TCF7L2 UCSC Txn Factor no Conserved 108551625
chr9 117481116 117481447 RUNX3 UCSC Txn Factor no Conserved 108551626
chr9 117481275 117481290 STAT1 JASPAR yes 86497646
chr9 117481275 117481290 STAT1 JASPAR yes 95405578
chr9 117481282 117481302 RREB1 JASPAR yes 86497649
chr9 117481282 117481302 RREB1 JASPAR yes 95405581
chr9 117481288 117481303 RUNX2 JASPAR yes 86497650
chr9 117481288 117481303 RUNX2 JASPAR yes 95405582
Genes associated with rs539400033[chr9:117481289], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More