EnhancerDB
  1. Home
  2. SNP
  3. rs539410656[chr1:225660880]
Enhancers that have rs539410656[chr1:225660880]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225660186 225673995 enh43159
Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas Muscle (Myotube) Blood (T-cell) Stomach
Transcript factors that have rs539410656[chr1:225660880]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225660878 225660883 SP1 TRANSFAC yes 35744743
chr1 225660880 225660885 TFAP2A TRANSFAC yes 35744744
chr1 225660880 225660886 MZF1 JASPAR yes 35744745
Genes associated with rs539410656[chr1:225660880], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More