EnhancerDB
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  3. rs539414506[chr17:77785999]
Enhancers that have rs539414506[chr17:77785999]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77780565 77806815 enh4626
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Stomach Muscle (A673) Placenta Blood (Karpas-422) Pancreas Pancreas (Panc1) Thymus Heart
Transcript factors that have rs539414506[chr17:77785999]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77784692 77787031 EZH2 UCSC Txn Factor no Conserved 108305323
chr17 77785122 77786995 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108305345
chr17 77785515 77786019 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108305405
chr17 77785570 77786180 ZNF143 GTRD no Epithelial (MCF-7) 21795949
chr17 77785570 77786180 ZNF143 GTRD no Epithelial (MCF-7) 108305406
chr17 77785605 77786068 TCF7L2 GTRD no Colon (HCT116) 108305407
chr17 77785754 77786347 ZNF143 GTRD no Epithelial (MCF-7) 21795950
chr17 77785817 77786413 ZNF143 GTRD no Epithelial (MCF-7) 21795951
chr17 77785942 77786079 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21795952
chr17 77785992 77786004 HINFP JASPAR yes 56220215
chr17 77785996 77786013 RARA JASPAR yes 56220216
Genes associated with rs539414506[chr17:77785999], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More