EnhancerDB
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  3. rs539438419[chr18:55509546]
Enhancers that have rs539438419[chr18:55509546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55498005 55517815 enh17733
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs539438419[chr18:55509546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55509434 55510600 ZNF274 GTRD no Blood (GM12878) 21823665
chr18 55509516 55511224 ZNF274 GTRD no Blood (GM12878) 21823666
chr18 55509533 55509547 POU4F1 JASPAR yes 110891881
chr18 55509535 55509546 NFIL3 JASPAR yes 110891882
chr18 55509537 55509552 HNF1A JASPAR yes 110891883
chr18 55509538 55509551 HNF1B JASPAR yes 110891885
chr18 55509545 55509560 JUND JASPAR yes 110891886
chr18 55509546 55509559 JUN JASPAR yes 110891887
Genes associated with rs539438419[chr18:55509546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More