EnhancerDB
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  3. rs539481897[chr17:2397347]
Enhancers that have rs539481897[chr17:2397347]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2383605 2399907 enh32054
Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Spleen Uterus Thymus Heart
Transcript factors that have rs539481897[chr17:2397347]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2391628 2397454 TCF7L2 GTRD no Colon (HCT116) 21739610
chr17 2391628 2397454 TCF7L2 GTRD no Colon (HCT116) 108230832
chr17 2392133 2397458 ZNF143 GTRD no Epithelial (MCF-7) 21739611
chr17 2392133 2397458 ZNF143 GTRD no Epithelial (MCF-7) 108230833
chr17 2394844 2397406 ZNF143 GTRD no Epithelial (MCF-7) 21739612
chr17 2394844 2397406 ZNF143 GTRD no Epithelial (MCF-7) 108230834
chr17 2394855 2397522 ZNF274 GTRD no Blood (GM12878) 108230835
chr17 2395071 2397873 ZBTB33 GTRD no Lung (A549) 108230836
chr17 2395173 2404783 ZBTB33 GTRD no Lung (A549) 108230837
chr17 2395298 2403874 ZBTB33 GTRD no Lung (A549) 108230839
chr17 2395324 2403241 ZBTB33 GTRD no Lung (A549) 108230840
chr17 2395381 2404083 ZBTB33 GTRD no Lung (A549) 108230841
chr17 2395394 2403035 ZNF274 GTRD no Cervix (HeLa-S3) 21739614
chr17 2395394 2403035 ZNF274 GTRD no Cervix (HeLa-S3) 108230842
chr17 2395508 2398296 ZBTB33 GTRD no Lung (A549) 108230843
chr17 2395514 2398510 ZBTB33 GTRD no Lung (A549) 108230844
chr17 2395518 2397870 ZBTB33 GTRD no Lung (A549) 108230845
chr17 2395565 2403182 ZBTB33 GTRD no Lung (A549) 108230847
chr17 2395647 2397752 ZNF143 GTRD no Epithelial (MCF-7) 21739615
chr17 2395647 2397752 ZNF143 GTRD no Epithelial (MCF-7) 108230848
chr17 2395677 2399004 ZNF274 GTRD no Bone Marrow (K562) 108230849
chr17 2395703 2397677 ZBTB33 GTRD no Lung (A549) 108230850
chr17 2395731 2397514 ZNF274 GTRD no Liver (HepG2) 21739617
chr17 2395731 2397514 ZNF274 GTRD no Liver (HepG2) 108230852
chr17 2395744 2403778 ZBTB33 GTRD no Lung (A549) 108230853
chr17 2395759 2397783 ZBTB33 GTRD no Lung (A549) 108230854
chr17 2395813 2397926 ZNF274 GTRD no Blood (GM12878) 108230855
chr17 2395814 2397390 ZNF274 GTRD no Bone Marrow (K562) 108230856
chr17 2395817 2397470 ZNF274 GTRD no Blood (GM12878) 108230857
chr17 2395831 2397654 ZNF274 GTRD no Blood (GM12878) 108230858
chr17 2395881 2397388 ZNF274 GTRD no Bone Marrow (K562) 108230859
chr17 2396198 2397579 TCF7L2 GTRD no Colon (HCT116) 21739618
chr17 2396198 2397579 TCF7L2 GTRD no Colon (HCT116) 108230862
chr17 2396204 2397413 ZNF143 GTRD no Epithelial (MCF-7) 21739619
chr17 2396204 2397413 ZNF143 GTRD no Epithelial (MCF-7) 108230863
chr17 2396241 2397481 P63 GTRD no Skin (Keratinocyte) 108230865
chr17 2396241 2402929 TCF7L2 GTRD no Colon (HCT116) 21739621
chr17 2396241 2402929 TCF7L2 GTRD no Colon (HCT116) 108230866
chr17 2396282 2397422 ZBTB33 GTRD no Lung (A549) 108230867
chr17 2396304 2397728 TCF7L2 GTRD no Colon (HCT116) 21739623
chr17 2396304 2397728 TCF7L2 GTRD no Colon (HCT116) 108230869
chr17 2396340 2397412 TCF7L2 GTRD no Colon (HCT116) 21739624
chr17 2396340 2397412 TCF7L2 GTRD no Colon (HCT116) 108230871
chr17 2396342 2397359 ZNF274 GTRD no Blood (GM12878) 108230872
chr17 2396367 2402892 TCF7L2 GTRD no Colon (HCT116) 21739625
chr17 2396367 2402892 TCF7L2 GTRD no Colon (HCT116) 108230873
chr17 2396380 2397349 ZNF274 GTRD no Liver (HepG2) 21739626
chr17 2396380 2397349 ZNF274 GTRD no Liver (HepG2) 108230874
chr17 2396385 2397453 ZNF274 GTRD no Liver (HepG2) 21739627
chr17 2396385 2397453 ZNF274 GTRD no Liver (HepG2) 108230875
chr17 2396411 2397436 TCF7L2 GTRD no Colon (HCT116) 21739630
chr17 2396411 2397436 TCF7L2 GTRD no Colon (HCT116) 108230878
chr17 2396419 2398777 ZNF274 GTRD no Bone Marrow (K562) 108230879
chr17 2396435 2397368 ZNF274 GTRD no Cervix (HeLa-S3) 21739633
chr17 2396435 2397368 ZNF274 GTRD no Cervix (HeLa-S3) 108230883
chr17 2396438 2397436 ZNF274 GTRD no Bone Marrow (K562) 108230884
chr17 2396448 2397450 ZNF143 GTRD no Epithelial (MCF-7) 21739634
chr17 2396448 2397450 ZNF143 GTRD no Epithelial (MCF-7) 108230885
chr17 2396453 2397363 ZBTB33 GTRD no Brain (SK-N-SH) 108230886
chr17 2396467 2397663 ZNF274 GTRD no Bone Marrow (K562) 108230889
chr17 2396474 2397415 ZNF143 GTRD no Epithelial (MCF-7) 21739635
chr17 2396474 2397415 ZNF143 GTRD no Epithelial (MCF-7) 108230890
chr17 2396474 2397445 ZNF274 GTRD no Bone Marrow (K562) 108230891
chr17 2396484 2397810 ZNF274 GTRD no Bone Marrow (K562) 108230894
chr17 2396503 2397363 ZNF274 GTRD no Liver (HepG2) 21739638
chr17 2396503 2397363 ZNF274 GTRD no Liver (HepG2) 108230896
chr17 2396506 2398034 ZBTB33 GTRD no Lung (A549) 108230897
chr17 2396521 2397376 ZNF274 GTRD no Liver (HepG2) 21739639
chr17 2396521 2397376 ZNF274 GTRD no Liver (HepG2) 108230898
chr17 2396540 2397407 ZNF274 GTRD no Liver (HepG2) 21739643
chr17 2396540 2397407 ZNF274 GTRD no Liver (HepG2) 108230902
chr17 2396550 2397694 ZNF274 GTRD no Bone Marrow (K562) 108230906
chr17 2396554 2397505 ZNF274 GTRD no Blood (GM12878) 108230907
chr17 2396565 2397357 ZNF143 GTRD no Epithelial (MCF-7) 21739645
chr17 2396565 2397357 ZNF143 GTRD no Epithelial (MCF-7) 108230910
chr17 2396595 2397384 ZNF274 GTRD no Blood (GM12878) 108230919
chr17 2396606 2397394 ZNF274 GTRD no Bone Marrow (K562) 108230924
chr17 2396607 2397356 ZNF274 GTRD no Bone Marrow (K562) 108230925
chr17 2396625 2397419 ZNF274 GTRD no Bone Marrow (K562) 108230936
chr17 2396626 2397374 ZNF274 GTRD no Blood (GM12878) 108230938
chr17 2396648 2397821 ZNF274 GTRD no Blood (GM12878) 108230944
chr17 2396749 2397369 ZNF274 GTRD no Liver (HepG2) 21739656
chr17 2396749 2397369 ZNF274 GTRD no Liver (HepG2) 108230960
chr17 2396780 2397402 ZNF274 GTRD no Liver (HepG2) 21739659
chr17 2396780 2397402 ZNF274 GTRD no Liver (HepG2) 108230964
chr17 2396828 2397347 ZNF143 GTRD no Epithelial (MCF-7) 21739660
chr17 2396828 2397347 ZNF143 GTRD no Epithelial (MCF-7) 108230970
chr17 2396847 2397380 ZBTB33 GTRD no Brain (SK-N-SH) 108230972
chr17 2397087 2397453 ZNF274 GTRD no Liver (HepG2) 21739662
chr17 2397087 2397453 ZNF274 GTRD no Liver (HepG2) 108230977
chr17 2397114 2397711 ZNF274 GTRD no Bone Marrow (K562) 108230978
chr17 2397125 2398138 ZNF274 GTRD no Blood (GM12878) 108230979
chr17 2397327 2397348 IRF1 JASPAR yes 52756308
chr17 2397333 2397354 IRF1 JASPAR yes 52756314
chr17 2397335 2397350 STAT2 JASPAR yes 52756315
chr17 2397337 2397358 IRF1 JASPAR yes 52756316
chr17 2397338 2397353 FOXP1 JASPAR yes 52756317
chr17 2397338 2397359 IRF1 JASPAR yes 52756318
chr17 2397342 2397363 IRF1 JASPAR yes 52756319
Genes associated with rs539481897[chr17:2397347], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More