EnhancerDB
  1. Home
  2. SNP
  3. rs539505222[chr1:28630004]
Enhancers that have rs539505222[chr1:28630004]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28620565 28631035 enh11678
Liver (HepG2) Kidney Large Intestine Ovary Placenta Muscle (Myoblast) Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs539505222[chr1:28630004]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28629992 28630004 HNF1B JASPAR yes 27758078
chr1 28629998 28630019 IRF1 JASPAR yes 27758080
chr1 28630000 28630015 PRDM1 JASPAR yes 27758082
chr1 28630000 28630015 STAT2 JASPAR yes 27758083
chr1 28630000 28630021 IRF1 JASPAR yes 27758084
chr1 28630001 28630022 IRF1 JASPAR yes 27758085
chr1 28630002 28630023 IRF1 JASPAR yes 27758086
chr1 28630003 28630018 FOXP1 JASPAR yes 27758087
chr1 28630003 28630024 IRF1 JASPAR yes 27758088
chr1 28630004 28630019 FOXP1 JASPAR yes 27758089
Genes associated with rs539505222[chr1:28630004], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More