EnhancerDB
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  3. rs539512725[chr17:78576216]
Enhancers that have rs539512725[chr17:78576216]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78568992 78597075 enh4631
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Blood (OCI-LY7) Lung (A549) Blood (GM12878) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs539512725[chr17:78576216]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78576206 78576225 REST JASPAR yes 56257114
chr17 78576211 78576216 SP1 TRANSFAC yes 56257115
chr17 78576212 78576217 SP1 TRANSFAC yes 56257116
chr17 78576212 78576218 SP1 TRANSFAC yes 56257117
chr17 78576216 78576229 NFKB2 JASPAR yes 56257118
Genes associated with rs539512725[chr17:78576216], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More