EnhancerDB
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  3. rs539552473[chr1:28106805]
Enhancers that have rs539552473[chr1:28106805]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28102645 28115035 enh11672
Cervix (HeLa-S3) Large Intestine Esophagus Thyroid Placenta Lung (PC-9) Pancreas Stomach
Transcript factors that have rs539552473[chr1:28106805]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28106797 28106807 HINFP JASPAR yes 27725410
chr1 28106797 28106808 ELK4 JASPAR yes 27725411
chr1 28106797 28106808 FLI1 JASPAR yes 27725412
chr1 28106797 28106810 ELF3 JASPAR yes 27725413
chr1 28106798 28106808 ELK1 JASPAR yes 27725414
chr1 28106798 28106808 ETV6 JASPAR yes 27725415
chr1 28106798 28106809 ELF5 JASPAR yes 27725416
chr1 28106798 28106810 EHF JASPAR yes 27725417
chr1 28106798 28106810 ELF1 JASPAR yes 27725418
chr1 28106798 28106810 ELF4 JASPAR yes 27725419
chr1 28106798 28106811 ELF1 JASPAR yes 27725420
chr1 28106798 28106812 SPI1 JASPAR yes 27725421
chr1 28106800 28106806 ETS1 JASPAR yes 27725422
chr1 28106800 28106806 SPI1 JASPAR yes 27725423
chr1 28106801 28106811 MZF1 JASPAR yes 27725424
Genes associated with rs539552473[chr1:28106805], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More