EnhancerDB
  1. Home
  2. SNP
  3. rs539557214[chr1:200311670]
Enhancers that have rs539557214[chr1:200311670]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs539557214[chr1:200311670]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200311655 200311670 FOXP1 JASPAR yes 34437066
chr1 200311656 200311671 FOXA1 JASPAR yes 34437068
chr1 200311657 200311677 RREB1 JASPAR yes 34437070
chr1 200311658 200311670 FOXI1 JASPAR yes 34437071
chr1 200311658 200311678 RREB1 JASPAR yes 34437072
chr1 200311661 200311681 RREB1 JASPAR yes 34437073
chr1 200311662 200311674 FOXI1 JASPAR yes 34437074
chr1 200311662 200311682 RREB1 JASPAR yes 34437075
chr1 200311663 200311678 FOXP1 JASPAR yes 34437076
chr1 200311666 200311678 FOXI1 JASPAR yes 34437077
chr1 200311670 200311685 FOXP1 JASPAR yes 34437078
Genes associated with rs539557214[chr1:200311670], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More