EnhancerDB
  1. Home
  2. SNP
  3. rs539558790[chr1:180987546]
Enhancers that have rs539558790[chr1:180987546]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180978005 180990735 enh789
Liver (HepG2) Blood (T-cell) Esophagus Placenta Thyroid Blood (Karpas-422) Thymus Stomach
Transcript factors that have rs539558790[chr1:180987546]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180987525 180987546 IRF1 JASPAR yes 33546593
chr1 180987526 180987547 IRF1 JASPAR yes 33546595
chr1 180987527 180987548 IRF1 JASPAR yes 33546597
chr1 180987528 180987549 IRF1 JASPAR yes 33546599
chr1 180987529 180987550 IRF1 JASPAR yes 33546601
chr1 180987530 180987551 IRF1 JASPAR yes 33546603
chr1 180987531 180987546 FOXP1 JASPAR yes 33546604
chr1 180987531 180987552 IRF1 JASPAR yes 33546605
chr1 180987532 180987547 FOXP1 JASPAR yes 33546606
chr1 180987532 180987553 IRF1 JASPAR yes 33546607
chr1 180987533 180987548 FOXP1 JASPAR yes 33546608
chr1 180987533 180987554 IRF1 JASPAR yes 33546609
chr1 180987534 180987549 FOXP1 JASPAR yes 33546610
chr1 180987534 180987555 IRF1 JASPAR yes 33546611
chr1 180987535 180987550 FOXP1 JASPAR yes 33546612
chr1 180987535 180987556 IRF1 JASPAR yes 33546613
chr1 180987536 180987551 FOXP1 JASPAR yes 33546614
chr1 180987538 180987553 FOXP1 JASPAR yes 33546615
chr1 180987539 180987560 IRF1 JASPAR yes 33546616
chr1 180987540 180987555 FOXP1 JASPAR yes 33546617
chr1 180987540 180987561 IRF1 JASPAR yes 33546618
chr1 180987545 180987560 FOXP1 JASPAR yes 33546619
chr1 180987546 180987567 IRF1 JASPAR yes 33546620
Genes associated with rs539558790[chr1:180987546], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More