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- rs539561866[chr1:204361426]
Enhancers that have rs539561866[chr1:204361426]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
204357985 |
204362135 |
enh109374 |
|
|
Transcript factors that have rs539561866[chr1:204361426]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
204361240
|
204364046
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107859904
|
|
|
chr1
|
204361248
|
204364080
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107859905
|
|
|
chr1
|
204361296
|
204364014
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107859906
|
|
|
chr1
|
204361325
|
204364029
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107859907
|
|
|
chr1
|
204361407
|
204361428
|
IRF1
|
JASPAR
|
yes
|
|
34698355
|
|
|
chr1
|
204361426
|
204361441
|
MEF2C
|
JASPAR
|
yes
|
|
34698361
|
|
Genes associated with rs539561866[chr1:204361426], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |