EnhancerDB
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  3. rs539604805[chr3:59264557]
Enhancers that have rs539604805[chr3:59264557]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 59257805 59265830 enh70597
Prostate (PC-3) Neural Stem Cells (H9)
Transcript factors that have rs539604805[chr3:59264557]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 59264547 59264560 DUXA JASPAR yes 2731233
chr3 59264547 59264561 POU4F1 JASPAR yes 2731234
chr3 59264547 59264563 POU4F3 JASPAR yes 2731235
chr3 59264548 59264559 PHOX2A JASPAR yes 2731236
chr3 59264548 59264559 PROP1 JASPAR yes 2731237
chr3 59264550 59264561 HOXA10 JASPAR yes 2731238
chr3 59264550 59264565 HNF1A JASPAR yes 2731239
chr3 59264551 59264561 GSX2 JASPAR yes 2731240
chr3 59264551 59264561 HOXB2 JASPAR yes 2731241
chr3 59264551 59264561 HOXB3 JASPAR yes 2731242
chr3 59264551 59264561 MNX1 JASPAR yes 2731243
chr3 59264551 59264561 POU6F1 JASPAR yes 2731244
chr3 59264551 59264564 HNF1B JASPAR yes 2731245
chr3 59264552 59264560 LMX1A JASPAR yes 2731246
chr3 59264552 59264560 LMX1B JASPAR yes 2731247
chr3 59264552 59264560 NKX6-1 JASPAR yes 2731248
chr3 59264552 59264560 NKX6-2 JASPAR yes 2731249
chr3 59264552 59264560 VAX1 JASPAR yes 2731250
chr3 59264552 59264560 VAX2 JASPAR yes 2731251
chr3 59264552 59264560 VSX1 JASPAR yes 2731252
chr3 59264552 59264560 VSX2 JASPAR yes 2731253
Genes associated with rs539604805[chr3:59264557], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More