EnhancerDB
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  3. rs539645870[chr1:178647479]
Enhancers that have rs539645870[chr1:178647479]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178647285 178660595 enh761
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Lung (A549) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast)
Transcript factors that have rs539645870[chr1:178647479]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178647467 178647488 IRF1 JASPAR yes 33437315
chr1 178647468 178647483 FOXP1 JASPAR yes 33437316
chr1 178647469 178647484 IRF9 JASPAR yes 33437317
chr1 178647470 178647484 IRF7 JASPAR yes 33437318
chr1 178647471 178647485 SPIC JASPAR yes 33437319
chr1 178647471 178647485 STAT1 JASPAR yes 33437320
chr1 178647471 178647486 STAT2 JASPAR yes 33437321
chr1 178647471 178647492 IRF1 JASPAR yes 33437322
chr1 178647475 178647496 IRF1 JASPAR yes 33437323
chr1 178647479 178647494 PRDM1 JASPAR yes 33437324
Genes associated with rs539645870[chr1:178647479], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More