EnhancerDB
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  3. rs539648354[chr17:77901525]
Enhancers that have rs539648354[chr17:77901525]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs539648354[chr17:77901525]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77901486 77901844 ZNF143 GTRD no Epithelial (MCF-7) 21796756
chr17 77901502 77901927 ZNF274 GTRD no Blood (GM12878) 21796757
chr17 77901512 77901529 RXRA JASPAR yes 56229991
chr17 77901519 77901534 HSF1 JASPAR yes 56229993
chr17 77901520 77901533 HSF2 JASPAR yes 56229994
Genes associated with rs539648354[chr17:77901525], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More