EnhancerDB
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  3. rs539653258[chr2:97438116]
Enhancers that have rs539653258[chr2:97438116]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 97426265 97442177 enh5715
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Heart
Transcript factors that have rs539653258[chr2:97438116]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 97438099 97438119 TBX19 JASPAR yes 75612868
chr2 97438101 97438117 T JASPAR yes 75612869
chr2 97438106 97438116 BHLHE40 JASPAR yes 75612870
chr2 97438106 97438116 HEY1 JASPAR yes 75612871
chr2 97438106 97438116 HEY2 JASPAR yes 75612872
chr2 97438107 97438118 NRF1 JASPAR yes 75612873
Genes associated with rs539653258[chr2:97438116], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More