EnhancerDB
  1. Home
  2. SNP
  3. rs539673543[chr2:224558700]
Enhancers that have rs539673543[chr2:224558700]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224553303 224571986 enh34322
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1)
Transcript factors that have rs539673543[chr2:224558700]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224558690 224558710 RREB1 JASPAR yes 81277718
chr2 224558691 224558711 RREB1 JASPAR yes 81277719
chr2 224558692 224558712 RREB1 JASPAR yes 81277720
chr2 224558697 224558717 RREB1 JASPAR yes 81277721
chr2 224558697 224558718 IRF1 JASPAR yes 81277722
Genes associated with rs539673543[chr2:224558700], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More