EnhancerDB
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  3. rs539698611[chr2:231566708]
Enhancers that have rs539698611[chr2:231566708]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 231540245 231567455 enh19309
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs539698611[chr2:231566708]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 231566702 231566712 HOXA13 JASPAR yes 81674637
chr2 231566702 231566712 HOXB13 JASPAR yes 81674638
chr2 231566702 231566712 HOXD13 JASPAR yes 81674639
chr2 231566702 231566713 HOXA10 JASPAR yes 81674640
chr2 231566702 231566717 MEF2A JASPAR yes 81674641
chr2 231566703 231566712 CDX1 JASPAR yes 81674642
chr2 231566703 231566714 CDX2 JASPAR yes 81674643
chr2 231566704 231566716 MEF2A JASPAR yes 81674644
chr2 231566704 231566716 MEF2D JASPAR yes 81674645
chr2 231566705 231566715 MEF2A JASPAR yes 81674646
Genes associated with rs539698611[chr2:231566708], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More