EnhancerDB
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  3. rs539737890[chr15:40749979]
Enhancers that have rs539737890[chr15:40749979]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40734866 40750009 enh3540
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Lung (A549) Blood (GM12878) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Blood (T-cell) Stomach
Transcript factors that have rs539737890[chr15:40749979]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40749968 40749982 PLAG1 JASPAR yes 22940065
chr15 40749975 40749980 SP1 TRANSFAC yes 22940066
chr15 40749976 40749981 SP1 TRANSFAC yes 22940067
chr15 40749976 40749985 THAP1 JASPAR yes 22940068
chr15 40749979 40749983 LFA1 TRANSFAC yes 22940069
Genes associated with rs539737890[chr15:40749979], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More