EnhancerDB
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  3. rs539745941[chr1:28190411]
Enhancers that have rs539745941[chr1:28190411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28182518 28193279 enh179
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs539745941[chr1:28190411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28190135 28191594 ZNF274 GTRD no Bone Marrow (K562) 107802621
chr1 28190406 28190424 IRF2 JASPAR yes 27728541
chr1 28190407 28190428 IRF1 JASPAR yes 27728542
chr1 28190411 28190426 IRF9 JASPAR yes 27728543
Genes associated with rs539745941[chr1:28190411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More