-
Home
- SNP
- rs539804353[chr16:85385620]
Enhancers that have rs539804353[chr16:85385620]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
85373850 |
85385979 |
enh16867 |
|
|
Transcript factors that have rs539804353[chr16:85385620]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
85382414
|
85387658
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108213875
|
|
|
chr16
|
85383429
|
85387668
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108213876
|
|
|
chr16
|
85385600
|
85385621
|
IRF1
|
JASPAR
|
yes
|
|
12051198
|
|
|
chr16
|
85385602
|
85385622
|
RREB1
|
JASPAR
|
yes
|
|
12051201
|
|
|
chr16
|
85385605
|
85385626
|
IRF1
|
JASPAR
|
yes
|
|
12051202
|
|
|
chr16
|
85385606
|
85385626
|
RREB1
|
JASPAR
|
yes
|
|
12051203
|
|
|
chr16
|
85385607
|
85385622
|
IRF9
|
JASPAR
|
yes
|
|
12051204
|
|
|
chr16
|
85385609
|
85385624
|
STAT2
|
JASPAR
|
yes
|
|
12051205
|
|
Genes associated with rs539804353[chr16:85385620], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |