EnhancerDB
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  3. rs539816414[chr1:206531413]
Enhancers that have rs539816414[chr1:206531413]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206527667 206534455 enh58206
Skin (Keratinocyte) Colon (HCT116) Lung (PC-9)
chr1 206531313 206531464 vista4768
VISTA
Transcript factors that have rs539816414[chr1:206531413]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206531066 206531514 ZNF274 GTRD no Blood (GM12878) 107862607
chr1 206531080 206531692 ZNF143 GTRD no Epithelial (MCF-7) 107862608
chr1 206531086 206531686 ZNF143 GTRD no Epithelial (MCF-7) 107862609
chr1 206531250 206531638 TCF7L2 GTRD no Colon (HCT116) 21372211
chr1 206531250 206531638 TCF7L2 GTRD no Colon (HCT116) 107862610
chr1 206531404 206531417 NFKB2 JASPAR yes 34799429
chr1 206531404 206531417 NFKB2 JASPAR yes 118442541
chr1 206531405 206531415 REL JASPAR yes 34799430
chr1 206531405 206531415 REL JASPAR yes 118442542
chr1 206531405 206531416 NFKB1 JASPAR yes 34799431
chr1 206531405 206531416 NFKB1 JASPAR yes 118442543
chr1 206531411 206531425 ZIC1 JASPAR yes 34799432
chr1 206531411 206531425 ZIC1 JASPAR yes 118442544
Genes associated with rs539816414[chr1:206531413], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More