EnhancerDB
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  3. rs539849112[chr17:71012221]
Enhancers that have rs539849112[chr17:71012221]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70997785 71016129 enh4589
Bone Marrow (K562) Prostate (PC-3) Lung (PC-9) Bone (Osteoblast) Stomach Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs539849112[chr17:71012221]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 71012201 71012222 IRF1 JASPAR yes 55844630
chr17 71012207 71012228 IRF1 JASPAR yes 55844632
chr17 71012209 71012224 PRDM1 JASPAR yes 55844633
chr17 71012209 71012224 STAT2 JASPAR yes 55844634
chr17 71012211 71012223 IRF1 JASPAR yes 55844635
chr17 71012212 71012223 HOXC12 JASPAR yes 55844636
chr17 71012217 71012231 IRF8 JASPAR yes 55844637
chr17 71012218 71012222 NFE TRANSFAC yes 55844638
chr17 71012218 71012223 GATA1 TRANSFAC yes 55844639
chr17 71012218 71012224 GATA3 JASPAR yes 55844640
chr17 71012220 71012236 ZNF143 JASPAR yes 55844641
Genes associated with rs539849112[chr17:71012221], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More