EnhancerDB
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  3. rs539858364[chr1:40854307]
Enhancers that have rs539858364[chr1:40854307]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40843025 40858135 enh273
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs539858364[chr1:40854307]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40854296 40854311 NFYB JASPAR yes 28327621
chr1 40854298 40854314 NFYA JASPAR yes 28327622
chr1 40854299 40854317 NFYA JASPAR yes 28327623
chr1 40854303 40854307 H1TF2 TRANSFAC yes 28327624
chr1 40854303 40854307 NFE TRANSFAC yes 28327625
chr1 40854303 40854307 SRF TRANSFAC yes 28327626
Genes associated with rs539858364[chr1:40854307], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More