EnhancerDB
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  3. rs539896051[chr1:42281150]
Enhancers that have rs539896051[chr1:42281150]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42263485 42281915 enh292
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Thymus Heart
Transcript factors that have rs539896051[chr1:42281150]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42281136 42281151 MEF2C JASPAR yes 28426206
chr1 42281137 42281158 IRF1 JASPAR yes 28426207
chr1 42281141 42281155 SPIC JASPAR yes 28426208
chr1 42281141 42281155 STAT1 JASPAR yes 28426209
chr1 42281141 42281156 PRDM1 JASPAR yes 28426210
chr1 42281141 42281156 STAT2 JASPAR yes 28426211
chr1 42281143 42281164 IRF1 JASPAR yes 28426212
chr1 42281145 42281166 IRF1 JASPAR yes 28426213
chr1 42281145 42281166 ZNF263 JASPAR yes 28426214
chr1 42281147 42281168 IRF1 JASPAR yes 28426215
chr1 42281148 42281163 FOXP1 JASPAR yes 28426216
chr1 42281149 42281170 IRF1 JASPAR yes 28426217
Genes associated with rs539896051[chr1:42281150], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More