EnhancerDB
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  3. rs539977863[chr1:235571607]
Enhancers that have rs539977863[chr1:235571607]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235558909 235574575 enh12802
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Pancreas (Panc1)
Transcript factors that have rs539977863[chr1:235571607]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235571596 235571612 POU4F2 JASPAR yes 36368028
chr1 235571596 235571612 POU4F3 JASPAR yes 36368029
chr1 235571598 235571612 POU4F1 JASPAR yes 36368030
chr1 235571598 235571613 HNF1A JASPAR yes 36368031
chr1 235571599 235571611 HNF1B JASPAR yes 36368032
chr1 235571599 235571612 HNF1B JASPAR yes 36368033
chr1 235571599 235571614 IRF9 JASPAR yes 36368034
chr1 235571601 235571619 IRF2 JASPAR yes 36368035
chr1 235571603 235571624 IRF1 JASPAR yes 36368036
chr1 235571607 235571622 FOXP1 JASPAR yes 36368037
Genes associated with rs539977863[chr1:235571607], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More