EnhancerDB
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  3. rs539987926[chr17:64940262]
Enhancers that have rs539987926[chr17:64940262]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64937699 64952845 enh17319
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs539987926[chr17:64940262]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64937384 64941120 ZNF143 GTRD no Epithelial (MCF-7) 21781904
chr17 64937407 64941181 ZNF143 GTRD no Epithelial (MCF-7) 21781905
chr17 64937651 64941627 ZNF143 GTRD no Epithelial (MCF-7) 21781907
chr17 64939909 64940375 ZNF143 GTRD no Epithelial (MCF-7) 21781951
chr17 64940254 64940265 NRF1 JASPAR yes 55472447
chr17 64940258 64940277 PAX5 JASPAR yes 55472448
Genes associated with rs539987926[chr17:64940262], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More