EnhancerDB
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  3. rs539997591[chr1:200254896]
Enhancers that have rs539997591[chr1:200254896]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs539997591[chr1:200254896]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200253459 200255000 ZNF274 GTRD no Blood (GM12878) 21362707
chr1 200253596 200255018 ZNF274 GTRD no Blood (GM12878) 21362709
chr1 200253599 200255148 ZNF274 GTRD no Blood (GM12878) 21362711
chr1 200253645 200254942 ZNF274 GTRD no Blood (GM12878) 21362712
chr1 200253657 200255003 ZNF274 GTRD no Blood (GM12878) 21362713
chr1 200253710 200254992 ZNF274 GTRD no Blood (GM12878) 21362715
chr1 200253774 200254902 ZNF274 GTRD no Blood (GM12878) 21362720
chr1 200253787 200254957 ZNF274 GTRD no Blood (GM12878) 21362721
chr1 200253801 200254918 ZNF274 GTRD no Blood (GM12878) 21362722
chr1 200253913 200255020 ZNF274 GTRD no Blood (GM12878) 21362732
chr1 200253924 200254900 ZNF274 GTRD no Blood (GM12878) 21362733
chr1 200254568 200254928 ZNF274 GTRD no Blood (GM12878) 21362748
chr1 200254622 200254985 ZNF274 GTRD no Blood (GM12878) 21362749
chr1 200254624 200254924 ZNF274 GTRD no Blood (GM12878) 21362750
chr1 200254875 200254896 ZNF263 JASPAR yes 34429077
chr1 200254877 200254898 ZNF263 JASPAR yes 34429078
chr1 200254878 200254899 ZNF263 JASPAR yes 34429079
chr1 200254880 200254901 ZNF263 JASPAR yes 34429080
chr1 200254882 200254903 ZNF263 JASPAR yes 34429081
chr1 200254885 200254906 ZNF263 JASPAR yes 34429082
chr1 200254887 200254908 ZNF263 JASPAR yes 34429083
chr1 200254888 200254909 ZNF263 JASPAR yes 34429084
chr1 200254892 200254913 ZNF263 JASPAR yes 34429085
Genes associated with rs539997591[chr1:200254896], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More