EnhancerDB
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  3. rs540005306[chr6:109517564]
Enhancers that have rs540005306[chr6:109517564]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109514085 109520535 enh55939
Prostate (PC-3) Large Intestine Stomach Peripheral Blood (MM.1S) Pancreas Epithelial (MCF-7)
Transcript factors that have rs540005306[chr6:109517564]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109517548 109517569 IRF1 JASPAR yes 104233489
chr6 109517549 109517564 FOXP1 JASPAR yes 104233490
chr6 109517549 109517570 IRF1 JASPAR yes 104233491
chr6 109517550 109517565 FOXP1 JASPAR yes 104233492
chr6 109517550 109517571 IRF1 JASPAR yes 104233493
chr6 109517551 109517566 FOXP1 JASPAR yes 104233494
chr6 109517551 109517572 IRF1 JASPAR yes 104233495
chr6 109517552 109517567 FOXP1 JASPAR yes 104233496
chr6 109517552 109517573 IRF1 JASPAR yes 104233497
chr6 109517553 109517568 FOXP1 JASPAR yes 104233498
chr6 109517555 109517570 FOXP1 JASPAR yes 104233499
chr6 109517556 109517577 IRF1 JASPAR yes 104233500
chr6 109517557 109517572 FOXP1 JASPAR yes 104233501
chr6 109517560 109517574 SPIC JASPAR yes 104233502
chr6 109517560 109517574 STAT1 JASPAR yes 104233503
chr6 109517560 109517575 PRDM1 JASPAR yes 104233504
chr6 109517560 109517575 STAT2 JASPAR yes 104233505
chr6 109517560 109517581 IRF1 JASPAR yes 104233506
chr6 109517562 109517583 IRF1 JASPAR yes 104233507
chr6 109517564 109517585 IRF1 JASPAR yes 104233508
chr6 109517564 109517585 ZNF263 JASPAR yes 104233509
Genes associated with rs540005306[chr6:109517564], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More