EnhancerDB
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  3. rs540017648[chr6:106996610]
Enhancers that have rs540017648[chr6:106996610]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 106992285 106999195 enh9275
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Breast
Transcript factors that have rs540017648[chr6:106996610]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 106996596 106996617 IRF1 JASPAR yes 104048890
chr6 106996598 106996619 IRF1 JASPAR yes 104048891
chr6 106996602 106996623 IRF1 JASPAR yes 104048892
chr6 106996603 106996618 FOXP1 JASPAR yes 104048893
Genes associated with rs540017648[chr6:106996610], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More