EnhancerDB
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  3. rs540025142[chr3:126465117]
Enhancers that have rs540025142[chr3:126465117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 126462305 126474475 enh35857
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung Lung (A549) Muscle (A673) Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs540025142[chr3:126465117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 126465113 126465122 HIC2 JASPAR yes 5490293
chr3 126465116 126465120 LFA1 TRANSFAC yes 5490294
Genes associated with rs540025142[chr3:126465117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More