EnhancerDB
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  3. rs540052099[chr1:205229896]
Enhancers that have rs540052099[chr1:205229896]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205223365 205237543 enh27434
Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Muscle (Myotube) Stomach
Transcript factors that have rs540052099[chr1:205229896]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205226550 205230994 ZNF274 GTRD no Bone Marrow (K562) 107861105
chr1 205226550 205230994 ZNF274 GTRD no Bone Marrow (K562) 107861106
chr1 205226697 205230957 ZNF143 GTRD no Epithelial (MCF-7) 107861109
chr1 205226697 205230957 ZNF143 GTRD no Epithelial (MCF-7) 107861110
chr1 205226704 205230305 ZBTB33 GTRD no Lung (A549) 107861113
chr1 205226704 205230305 ZBTB33 GTRD no Lung (A549) 107861114
chr1 205226750 205229985 ZNF143 GTRD no Epithelial (MCF-7) 107861117
chr1 205226750 205229985 ZNF143 GTRD no Epithelial (MCF-7) 107861118
chr1 205227242 205231056 ZNF274 GTRD no Bone Marrow (K562) 107861137
chr1 205227242 205231056 ZNF274 GTRD no Bone Marrow (K562) 107861138
chr1 205227282 205230272 ZNF143 GTRD no Epithelial (MCF-7) 107861141
chr1 205227282 205230272 ZNF143 GTRD no Epithelial (MCF-7) 107861142
chr1 205228093 205230386 ZNF143 GTRD no Epithelial (MCF-7) 107861362
chr1 205228121 205230181 ZBTB33 GTRD no Lung (A549) 107861364
chr1 205229885 205229897 SRF JASPAR yes 34748715
chr1 205229889 205229902 DUXA JASPAR yes 34748717
chr1 205229890 205229901 DUX4 JASPAR yes 34748718
chr1 205229895 205229907 PBX1 JASPAR yes 34748719
Genes associated with rs540052099[chr1:205229896], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More