EnhancerDB
  1. Home
  2. SNP
  3. rs540052429[chr3:124320424]
Enhancers that have rs540052429[chr3:124320424]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124309245 124355975 enh20876
Bone Marrow (K562) Liver Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs540052429[chr3:124320424]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124320417 124320424 NKX3-1 JASPAR yes 5387564
Genes associated with rs540052429[chr3:124320424], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More