EnhancerDB
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  3. rs540052863[chr1:200310879]
Enhancers that have rs540052863[chr1:200310879]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs540052863[chr1:200310879]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200310286 200310882 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21363144
chr1 200310874 200310879 GATA1 TRANSFAC yes 34436929
chr1 200310877 200310897 RREB1 JASPAR yes 34436930
chr1 200310879 200310899 RREB1 JASPAR yes 34436931
Genes associated with rs540052863[chr1:200310879], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More