EnhancerDB
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  3. rs540064856[chr1:110500717]
Enhancers that have rs540064856[chr1:110500717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110494965 110506335 enh12130
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Ovary Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs540064856[chr1:110500717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110500703 110500719 POU4F2 JASPAR yes 31455792
chr1 110500703 110500719 POU4F3 JASPAR yes 31455793
chr1 110500705 110500719 POU4F1 JASPAR yes 31455795
chr1 110500710 110500724 POU1F1 JASPAR yes 31455796
chr1 110500711 110500724 POU2F2 JASPAR yes 31455797
chr1 110500714 110500729 FOXP1 JASPAR yes 31455798
chr1 110500715 110500736 IRF1 JASPAR yes 31455799
chr1 110500716 110500736 RREB1 JASPAR yes 31455800
chr1 110500717 110500728 FOXP2 JASPAR yes 31455801
Genes associated with rs540064856[chr1:110500717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More