EnhancerDB
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  3. rs540068202[chr5:78102732]
Enhancers that have rs540068202[chr5:78102732]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78085970 78109615 enh22384
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
chr5 78102378 78102749 vista48174
VISTA
Transcript factors that have rs540068202[chr5:78102732]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78102728 78102740 TAL1 JASPAR yes 63625909
chr5 78102728 78102740 TAL1 JASPAR yes 70670092
chr5 78102730 78102740 MSC JASPAR yes 63625910
chr5 78102730 78102740 TFAP4 JASPAR yes 63625911
chr5 78102730 78102740 MSC JASPAR yes 70670093
chr5 78102730 78102740 TFAP4 JASPAR yes 70670094
chr5 78102730 78102742 TAL1 JASPAR yes 63625912
chr5 78102730 78102742 TAL1 JASPAR yes 70670095
Genes associated with rs540068202[chr5:78102732], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More