EnhancerDB
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  3. rs540192228[chr5:173845386]
Enhancers that have rs540192228[chr5:173845386]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173844165 173855575 enh46029
Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs540192228[chr5:173845386]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173845382 173845394 PKNOX1 JASPAR yes 67949570
chr5 173845382 173845394 PKNOX2 JASPAR yes 67949571
chr5 173845382 173845394 TGIF2 JASPAR yes 67949572
Genes associated with rs540192228[chr5:173845386], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More