EnhancerDB
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  3. rs540249671[chr1:56040843]
Enhancers that have rs540249671[chr1:56040843]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 56036104 56052895 enh26722
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus
Transcript factors that have rs540249671[chr1:56040843]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 56040831 56040844 SCRT2 JASPAR yes 29050811
chr1 56040841 56040856 FOXP1 JASPAR yes 29050812
Genes associated with rs540249671[chr1:56040843], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More