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- rs540253525[chr17:39288412]
Enhancers that have rs540253525[chr17:39288412]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
39285700 |
39292835 |
enh32192 |
|
|
Transcript factors that have rs540253525[chr17:39288412]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
39288170
|
39288440
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
21757412
|
|
|
chr17
|
39288176
|
39288552
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
21757413
|
|
|
chr17
|
39288203
|
39288667
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
21757414
|
|
|
chr17
|
39288269
|
39288549
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
21757415
|
|
|
chr17
|
39288402
|
39288412
|
HMBOX1
|
JASPAR
|
yes
|
|
54249795
|
|
Genes associated with rs540253525[chr17:39288412], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |