EnhancerDB
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  3. rs540276040[chr1:178573205]
Enhancers that have rs540276040[chr1:178573205]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178572424 178586155 enh756
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs540276040[chr1:178573205]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178572599 178573291 ZNF274 GTRD no Cervix (HeLa-S3) 21352625
chr1 178573046 178574011 ZNF274 GTRD no Blood (GM12878) 21352627
chr1 178573112 178574011 ZNF274 GTRD no Blood (GM12878) 21352628
chr1 178573201 178573222 IRF1 JASPAR yes 33427240
chr1 178573203 178573218 PRDM1 JASPAR yes 33427241
Genes associated with rs540276040[chr1:178573205], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More