EnhancerDB
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  3. rs540280517[chr16:70453921]
Enhancers that have rs540280517[chr16:70453921]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 70431585 70455744 enh4120
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540280517[chr16:70453921]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 70453911 70453927 GLIS1 JASPAR yes 11317094
chr16 70453911 70453928 RARA JASPAR yes 11317095
chr16 70453912 70453926 GLIS2 JASPAR yes 11317096
chr16 70453913 70453923 SP1 JASPAR yes 11317097
chr16 70453913 70453923 ZNF740 JASPAR yes 11317098
chr16 70453914 70453924 ZNF740 JASPAR yes 11317099
chr16 70453916 70453937 IRF1 JASPAR yes 11317100
chr16 70453917 70453932 PRDM1 JASPAR yes 11317101
chr16 70453919 70453933 SPI1 JASPAR yes 11317102
chr16 70453919 70453933 SPIC JASPAR yes 11317103
chr16 70453921 70453942 IRF1 JASPAR yes 11317104
Genes associated with rs540280517[chr16:70453921], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More